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Contents:

  • Getting Started with PolyConstruct
  • Input files
  • Monomer design
  • Worked Examples
  • PolyBuild
  • PolyConf
  • PolyTop
PolyConstruct
  • Index

Index

C | D | E | G | M | N | P | R | S

C

  • cleanup() (PDB method)
  • copy() (Monomer method)
    • (Polymer method)
  • crudesave() (PDB method)

D

  • dihedral_solver() (Polymer method)
  • dist() (Polymer method)

E

  • extend() (Polymer method)

G

  • gen_pairlist() (Polymer method)
  • gencomp() (Polymer method)

M

  • maxresid() (Polymer method)
  • module
    • polybuild
    • polybuild.ITP2RTP
    • polybuild.RTPcharge
    • polyconf
  • Monomer (class in polyconf)
  • monomer_from_u() (Monomer class method)

N

  • newresid() (Polymer method)

P

  • PDB (class in polyconf)
  • polybuild
    • module
  • polybuild.ITP2RTP
    • module
  • polybuild.RTPcharge
    • module
  • polyconf
    • module
  • Polymer (class in polyconf)

R

  • renamer() (Polymer method)
  • rotate() (Polymer method)

S

  • save() (PDB method)
  • select_atoms() (Monomer method)
    • (PDB method)
    • (Polymer method)
  • shuffle() (Polymer method)
  • shuffler() (Polymer method)

© Copyright 2024, Rangika Munaweera, Ada Quinn, Luna Morrow, Megan O'Mara. A Python library for constructing polymer topologies and coordinates.